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U27. High Performance Computing,

U27. High Performance Computing,

U27-S06. Mass storage

Mass storage

we provide a robust and versatile solution to handle large amounts of data efficiently based on market-leading technology. We have high-performance distributed storage to store experimental data during your work and make it accessible within our infrastructure for all tasks that require it. Our system of triple replication on network guarantees data integrity and availability at all times.

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U27-S05. Massive Parallel Processing

Massive Parallel Processing

Harnessing the power of parallel computing, we tackle large-scale data challenges with efficiency.With a large amount of equipment for calculations and processing on CPU and GPU, we can accelerate the work of months, in conventional equipment, to hours on our infrastructure. As evidenced by the approval of a large number of researchers in the area who have conducted their research on it.

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U27-S01. Remote access to HPC

Remote access to HPC

The HPC service allows remote access to High Performance Computing, Massive Parallel Processing, Mass Storage and different software applications. Designed to meet the demands of projects requiring exceptional computational performance, our service provides users with the flexibility and power to address a wide variety of challenges. It responds to the increasing complexity of simulations carried out by the most advanced research projects.

Customer benefits

The “Remote Access to Infrastructure with Massively Parallel Processing in HPC” service offers our clients distinctive advantages that not only meet their requirements but also add significant value to their Research and Development projects. 

  • Exceptional Performance: We provide our clients with access to cutting-edge HPC infrastructure, ensuring exceptional computational performance. 
  • Flexibility for Various Applications: Our service is generic and highly adaptable, satisfying a wide variety of R&D applications. 
  • Elimination of Geographic Restrictions: By offering secure remote access to our infrastructure, we eliminate geographic limitations.

Essential Scenarios:

  • Cutting-edge Scientific Research: Our service is essential for projects that require significant computational power, such as detailed molecular dynamics simulations, biomedical and biochemical modeling, simulations of all types, etc. 
  • Development of High-Performance Algorithms: our service is crucial for testing and optimizing high-performance algorithms, ensuring efficient execution in production environments. 
  • Complex Data Analysis and Big Data: In projects that involve the analysis of large data sets, from genomic sequencing to artificial intelligence, our service allows for massively parallel processing, improving the speed and accuracy of the analysis.

Target customer

The service is designed to meet the specific needs of diverse user groups, allowing them to take full advantage of massively parallel processing capabilities. 

  • Scientific Researchers and Academics: We provide access to cutting-edge HPC infrastructure, allowing them to perform advanced simulations, complex modeling and data analysis at a scale that goes beyond the capabilities of conventional systems. 
  • High Performance Software Development Teams: Intensive algorithms and high-performance applications, we offer a scalable platform that facilitates extensive testing and optimization to ensure optimal performance. 
  • Biomedical Research Institutions: can leverage our infrastructure for the analysis of large data sets, detailed simulations and complex studies, driving significant advances in the understanding of diseases and the development of therapies. 
  • Artificial Intelligence and Machine Learning teams: can leverage our infrastructure for training complex models and analyzing massive data sets.

Additional information

The HPC service has more than 3260 cores and 5920 parallel processing threads, 26TB of RAM, 264TB NVMe and 400TB HDD of shared storage, all connected by a 100Gbps backbone network. In addition, we currently offer 251,392 CUDA cores, 720GB graphics memory, 1,179.42 peak FP16 TFLOPS, and 828.6 peak FP32 TFLOPS.

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U27-S02. Software installation on demand

Software installation on demand

This Unit offers an exceptional software installation service that is not present in our infrastructure. We study each case to try to find the best solution, as long as it fits the technical characteristics, both hardware and software of the Unit.

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U27-S03. Biomedical signals processing

Biomedical signals processing

In our continued commitment to providing advanced solutions in High-Performance Computing (HPC), we are proud to present our specialized service in “Biomedical Signal Processing”. This service harnesses the power of high-performance computing to facilitate the analysis and interpretation of biomedical signals, offering advanced solutions for a variety of clinical and research scenarios.
The HPC service allows remote access to High Performance Computing, Massive Parallel Processing, Mass Storage and different software applications. It responds to the increasing complexity of simulations carried out by the most advanced research projects.

Customer benefits

The “Biomedical Signal Processing” service offers our clients specific advantages by providing access to our advanced High-Performance Computing (HPC) infrastructure, adding significant value to your Research and Development (R&D) activities. Focusing on the critical scenarios in where our service becomes essential, we highlight the following advantages: 

  • Validation of Theoretical Models: We allow researchers to validate and adjust theoretical organ models through detailed simulations, using computing power to compare theoretical results with experimental data. 
  • Custom Algorithm Development: Researchers and scientists can leverage HPC infrastructure to develop and refine custom signal processing algorithms tailored to their specific research objectives. 
  • Analysis of Large Data Sets: For projects involving the analysis of large data sets of biomedical signals, we offer the processing power necessary to perform detailed evaluations and extract meaningful patterns.

Target customer

Access to our HPC infrastructure is designed to meet the needs of diverse user groups, allowing them to perform specialized calculations and experiments in the field of biomedical signal processing.

  • Researchers and Scientists: We offer biomedical engineering  researchers access to HPC resources to perform advanced simulations, validate theoretical models and explore new perspectives in the diagnosis and treatment of cardiac diseases.
  • Biomedical Algorithm Developers: For those focused on developing and refining specific signal processing algorithms, we provide the necessary infrastructure to implement and evaluate custom algorithms.
  • Healthcare Professionals and Biomedical Engineers: Healthcare professionals and biomedical engineers can use our HPC platform to analyze and process large signal data sets, improving efficiency in the analysis of clinical information and the development of advanced medical technologies.
  • Biomedical Technology Companies: We provide them with the ability to test and validate their products in simulated environments, optimizing the performance and precision of their solutions.

Additional information

The HPC service has more than 3260 cores and 5920 parallel processing threads, 26TB of RAM, 264TB NVMe and 400TB HDD of shared storage, all connected by a 100Gbps backbone network. In addition, we currently offer 251,392 CUDA cores, 720GB graphics memory, 1,179.42 peak FP16 TFLOPS, and 828.6 peak FP32 TFLOPS.

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U27-S04. Modeling of the functional behaviour of tissues and organs

Modeling of the functional behaviour of tissues and organs

In our continued commitment to providing advanced solutions in High-Performance Computing (HPC), we are pleased to introduce our “Modeling the Functional Behavior of Tissues and Organs” service. This service leverages the power of high-performance computing, massively parallel processing, mass storage and different software applications to provide detailed and accurate analysis of the functional dynamics of tissues and organs.

Customer benefits

Our service significantly reduces work times, moving simulation processes from weeks to days. Additionally, it enables the simulation of different scenarios and parameters simultaneously.

  • Precision and Reliability: Our High-Performance Computing (HPC)-based simulations provide an unmatched level of precision and reliability in modeling the behavior of tissues and organs. This ensures reliable results and high-quality data to inform critical research decisions. 
  • Effective Optimization: By addressing the complexities of biological processes, our service facilitates the optimization of intervention strategies. Organizations can make precise adjustments to treatments and procedures, reducing costs and improving the effectiveness of therapeutic approaches. 
  • Risk Reduction in Development: Through virtual simulations of medical scenarios, organizations can identify and mitigate risks before practical implementation. This is essential in Research and Development, where error reduction and continuous improvement are imperative.

Target customer

Our “Modeling of the Functional Behavior of Tissues and Organs” service is designed to meet the specific needs of various stakeholders engaged in Research and Development, offering solutions adapted to the particular demands of the following key audience:

  • Biomedical and Scientific Researchers: providing them with advanced tools to thoroughly understand the functional behavior of tissues and organs. We facilitate detailed analysis of complex data and simulation of relevant scenarios to drive significant advances in scientific knowledge.
  • Pharmaceutical and Biotechnology Companies: making it easier to obtain detailed information on the response of tissues to specific compounds, accelerating the development process and improving success rates in creating effective treatments.
  • Health Professionals and Clinicians: personalized medicine, facilitating the personalization of treatments, allowing health professionals to adapt interventions according to the individual characteristics of patients. This is particularly valuable in optimizing therapeutic protocols and improving clinical outcomes.
  • Academic Research Institutions: essential for academics and students engaged in the exploration and understanding of biological processes.

Additional information

The HPC service has more than 3260 cores and 5920 parallel processing threads, 26TB of RAM, 264TB NVMe and 400TB HDD of shared storage, all connected by a 100Gbps backbone network. In addition, we currently have 251,392 CUDA cores, 720GB graphics memory, 1,179.42 peak FP16 TFLOPS, and 828.6 peak FP32 TFLOPS.

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U27-E03. Licensed software

Licensed software:

  • Matlab 202*
  • Abaqus2022
  • Ansys
  • Comsol60
  • Gaussian

* possibility of adding any other software compatible with Linux-type systems

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U27-E02. Open source software

Open source software:

  • HTCondor 9.0 (HTC) job scheduler
  • Python 3.*
  • Python 2.7.18 (python2)
  • GCC/G++ 7/8/9
  • CMake 3.16.3
  • R version 4.2.0
  • OpenFoam
  • LAMMPS
  • LIGGGHTS
  • spparks
  • tetgen(1.6)
  • ovito-2.9 (/home/software/bin/ovito-2.9)
  • paraview
  • sox y libsox-fmt-all
  • ffmpeg
  • mpich
  • git

* possibility of adding any other software compatible with Linux-type systems

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U27-E01. Hermes cluster

Hermes Cluster: The cluster is unit 27 of NANBIOSIS, HERMES has more than 3260 cores and 5920 parallel processing threads, 26TB of RAM, 264TB nvme and 400TB HDD of shared storage, all connected by a 100Gbps backbone network. In addition, we currently have 251,392 cuda cores, 720GB graphics memory, 1,179.42 peak FP16 TFLOPS, and 828.6 peak FP32 TFLOPS. HERMES is capable of processing a year’s worth of work on a personal computer in just 3 hours, greatly accelerating the work of researchers. Technical staff maintain the system and offer technical support, advice on parallel and high-performance supercomputing.

Highlighted figures:

  • +3,260 Cores
  • +5920 Threads
  • 26TB RAM
  • 264TB NVMe
  • 400TB HDD
  • 100 Gbps backbone
  • 251,392 CUDA cores
  • 720 GB Graphics memory
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